TextCNN是一个基于一维卷积神经网络的模型,专为处理SMILES字符串而设计,适用于分类和回归任务。该模型将输入的SMILES字符串转换为嵌入向量,通过一系列卷积滤波器进行卷积和池化,拼接后经过密集层和Highway层处理,最终根据任务类型通过密集层输出结果。
| 组件 | 版本 |
|---|---|
| Python | 3.10.19 |
| PyTorch | 2.1.0 |
| torch_npu | 2.1.0.post13 |
| CANN | 8.1.RC1 |
| 设备型号 | NPU 配置 |
|---|---|
| Atlas 800T A2 | 单卡 |
| 镜像环境 | 镜像地址 |
|---|---|
| 公网 | swr.cn-southwest-2.myhuaweicloud.com/atelier/pytorch_2_1_ascend:pytorch_2.1.0-cann_8.1.rc1-py_3.10-euler_2.10.11-aarch64-snt9b-20250603154214-4e60e43 |
IMAGE_ID=swr.cn-southwest-2.myhuaweicloud.com/atelier/pytorch_2_1_ascend:pytorch_2.1.0-cann_8.1.rc1-py_3.10-euler_2.10.11-aarch64-snt9b-20250603154214-4e60e43
CONTAINER_NAME=textcnn
docker run -u root --privileged \
--name ${CONTAINER_NAME} \
--device /dev/davinci0 \
--device /dev/davinci_manager \
--device /dev/devmm_svm \
--device /dev/hisi_hdc \
-v /usr/local/dcmi:/usr/local/dcmi \
-v /usr/local/bin/npu-smi:/usr/local/bin/npu-smi \
-v /usr/local/Ascend/driver:/usr/local/Ascend/driver \
-v /etc/ascend_install.info:/etc/ascend_install.info \
-itd ${IMAGE_ID} /bin/bashdocker exec -it ${CONTAINER_NAME} bash
conda create -n molformer --clone PyTorch-2.1.0
conda activate textcnn直接安装deepchem-ascend二进制包,模型已基于适配代码重新编译成二进制包上传pypi
pip install deepchem-ascend==0.0.6测试数据example_classification.csv存放于测试代码同级目录下。
import numpy as np
import os
import deepchem as dc
import torch
from deepchem.models.torch_models.text_cnn import default_dict, TextCNN
from deepchem.models.torch_models import TextCNNModel
import torch.nn as nn
np.random.seed(123)
n_tasks = 1
current_dir = os.path.dirname(os.path.abspath(__file__))
featurizer = dc.feat.RawFeaturizer()
tasks = ["outcome"]
input_file = os.path.join(current_dir, "example_classification.csv")
loader = dc.data.CSVLoader(tasks=tasks, feature_field="smiles", featurizer=featurizer)
dataset = loader.create_dataset(input_file)
classification_metric = dc.metrics.Metric(dc.metrics.accuracy_score)
char_dict, length = TextCNNModel.build_char_dict(dataset)
batch_size = 10
model = TextCNNModel(n_tasks,
char_dict=char_dict,
seq_length=length,
batch_size=batch_size,
learning_rate=0.001,
use_queue=False,
mode="classification",
log_frequency=10)
# Fit trained model
model.fit(dataset, nb_epoch=200)
# Eval model on train
scores = model.evaluate(dataset, [classification_metric])
print(f"scores[classification_metric.name]: {scores[classification_metric.name]}")
model_device = next(model.model.parameters()).device
print(f"Model device: {model_device}")
assert model_device.type == 'npu', f"Model should be on NPU, but got {model_device}"
print("NPU test passed!")复制上述测试代码保存到test_textcnn.py
pytest test_textcnn.py